一、期刊论文

[1] Mao G, Pang Z, Zuo K, Wang Q, Pei X, Chen X, Liu J*. Predicting gene regulatory links from single-cell RNA-seq data using graph neural networks. Briefings in Bioinformatics, 2023, 24(6). （SCI一区，IF=13.994，ESI高被引论文）DOI: 10.1093/bib/bbad414

[2] Mao G, Zeng R, Peng J, Zuo K, Pang Z, Liu J*. Reconstructing gene regulatory networks of biological function using differential equations of multilayer perceptrons. BMC Bioinformatics, 2022, 23:503. （SCI二区，IF=3.5，ESI高被引论文）DOI: 10.1186/s12859-022-05055-5

[3] Mao G, Pang Z, Zuo K, Liu J. Gene regulatory network inference using convolutional neural networks from scRNA-seq. Journal of Computational Biology, 2023, 30:1–13. （SCI二区，IF=1.4）
DOI: 10.1089/cmb.2022.035

[4] Mao G, Wang S L*, Zhang W. Prediction of Potential Associations Between MicroRNA and Disease Based on Bayesian Probabilistic Matrix. Journal of Computational Biology, 2019, 26(9):1030–1039. （SCI二区，IF=1.4）DOI: 10.1089/cmb.2019.0012

[5] Zhao W, Pei Q, Zhu Y, Zhan D, Mao G, Wang M, Qiu Y, Zuo K, Pei H, Sun LQ, Wen M, Tan R. The Association of R-Loop Binding Proteins Subtypes with CIN Implicates Therapeutic Strategies in Colorectal Cancer. Cancers, 2022, 14:5607. （SCI一区，IF=4.5）

二、会议论文

[1] Mao G, Yip H F, Lyu A*, Zhang L*. IDCLP: A Deep Learning Framework for Predicting Chemical-Induced Gene Expression Profiles through Multisource Data Integration. Proceedings of the 2025 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2025, CCF B类会议), 2025.DOI: 10.1109/BIBM66473.2025.11356206

[2] Mao G, Liu J*. An Unsupervised Deep Learning Framework for Gene Regulatory Network Inference from Single-Cell Expression Data. Proceedings of the 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2023, CCF B类会议), 2023.DOI: 10.1109/BIBM58861.2023.10385528

[3] Mao G, Pang Z, Liu J*, Zuo K. A Neuro-Genetic Approach for Inferring Gene Regulatory Networks from Gene Expression Data. Proceedings of the 9th International Conference on Bioinformatics Research and Applications (ICBRA 2022), 2022.DOI: 10.1145/3569192.3569193

[4] Mao G, Pang Z, Zuo K, Liu J. GGN: A Model-Free, Data-Driven Deep Learning Framework for Reconstructing Gene Regulatory Networks. Proceedings of the 13th International Conference on Bioscience, Biochemistry and Bioinformatics (ICBBB 2023), 2023. DOI: 10.1145/3586139.358615

[5] Mao G, Wang S L*. A Novel Approach to Predicting miRNA-Disease Associations. In: Huang D S, Jo K H, Huang Z K (Eds.). Intelligent Computing Theories and Application (ICIC 2019), 2019.
DOI: 10.1007/978-3-030-26969-2_34