w Chao Deng, Hong-Dong Li, Jianxin Wang. Improving cancer gene prediction by enhancing common information between the PPI network and gene functional association[C]. AAAI, 2025. (CCF A 类会议, 入选 Oral)

w Chao Deng, Hong-Dong Li, Li-Shen Zhang, Yiwei Liu, Yaohang Li, Jianxin Wang. Identifying new cancer genes based on the integration of annotated gene sets via hypergraph neural networks[C]. The International Conference on Intelligent Systems for Molecular Biology (ISMB), 2024. (全球计算生物学最顶级的两个会议之一，并发表在 CCF A 类期刊上)

w Hong-Dong Li, Chao Deng, et al. A gene set-integrated approach for predicting disease-associated genes[J]. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2022, 20(6): 3440-3450. (共同一作, CCF B 类期刊)

w Chao Deng, Cui-Xiang Lin, Hong-Dong Li. Improving the prediction of disease-associated genes by integrating annotated gene sets[C]//2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).IEEE, 2021: 386-391. (CCF B 类会议)

w Cui-Xiang Lin, Hong-Dong Li, Chao Deng, Jianxin Wang, et al. AlzCode: a platform for multiview analysis of genes related to Alzheimer’s disease[J]. Bioinformatics, 2022, 38(7): 2030-2032. (CCF A 类期刊)

w Cui-Xiang Lin, Hong-Dong Li, Chao Deng, Jianxin Wang, et al. TissueNexus: a database of human tissue functional gene networks built with a large compendium of curated RNA-seq data[J]. Nucleic acids research, 2022, 50(D1): D710-D718. (中科院一区期刊)

w Cui-Xiang Lin, Hong-Dong Li, Chao Deng, Jianxin Wang, et al. An integrated brain-specific network identifies genes associated with neuropathologic and clinical traits of Alzheimer’s disease[J]. Briefings in Bioinformatics, 2022, 23(1): bbab522. (中科院一区期刊)